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In the first part of the presentation, we discuss a double-stranded elastic rod (birod) model and apply it to study allosteric interactions between two ligands on DNA. Next, we combine the birod model with statistical mechanics and use it to study the temperature-induced strand separation in dsDNA. Allosteric interaction between two ligands on DNA is […] |
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Abstract: Mathematical Justification of Slender Body Theory Systems in which thin filaments interact with the surrounding fluid abound in science and engineering. The computational and analytical difficulties associated with treating thin filaments as 3D objects has led to the development of slender body theory, in which filaments are approximated as 1D curves in a 3D […] |
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PICS Seminar – Dr. Cesar de la Fuente of the University of Pennsylvania, Perelman School of Medicine
PICS Seminar – Dr. Cesar de la Fuente of the University of Pennsylvania, Perelman School of Medicine
Abstract: Until now, the natural world has supplied us with antibiotics. Bacteria, however, are increasingly resistant to these drugs. The next generation of antibiotics will likely come not from nature but from computer-based discovery. Working at the forefront of this development, I seek to harness computational power to find molecules with antibacterial activity. I use […] |
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